What is PathVisio?

PathVisio is a free open-source biological pathway analysis software that allows you to draw, edit and analyze biological pathways. Learn more.

How to use PathVisio?

Learn how to download PathVisio and go through the tutorials to find out how to do pathway analysis and how to visualize and analyze your data. Get started.

PathVisio Plugins

Plugins are extensions that provide advanced analysis methods, visualization options or additional import/export functionality. Find out more.



  • pathvisio3
  • pluginmanger
  • bridgedbconfig
  • htmlexport
  • graphic-9.large
    http://www.ncbi.nlm.nih.gov/pubmed/22390970

News

  • BioSB 2015 Application Showcase: Martina Kutmon presented WikiPathways, PathVisio and the WikiPathways App for Cytoscape and won the best application showcase prize. Congratulations!
  • New PathVisio 3 paper!! “PathVisio 3: An Extendable Pathway Analysis Toolbox.” PLoS Comput Biol. 2015 Feb 23;11(2):e1004085. doi: 10.1371/journal.pcbi.1004085
  • Developer website: The previous website will stay available on developers.pathvisio.org and will be used as a developers website.
  • Plugin repository: Find plugins in the plugin repository and install them through the plugin manager.

 

Releases

  • Feb 28 2015 PathVisio 3.2.0 has been released!
  • Jan 31 2014 PathVisio 3.1.3 has been released!
  • Oct 29 2013 PathVisio 3.1.2 has been released!
  • Oct 04 2013 PathVisio 3.1.1 has been released!
  • Jul 02 2013 PathVisio 3.1.0 has been released!
  • Jun 06 2013 PathVisio 3.0.1 has been released!

Check out the detailed release notes on our developers website.