|
#1133
|
Saving fails after automatic logout in WikiPathways
|
minor
|
Wikipathways applet
|
|
AlexanderPico
|
new
|
03/03/10
|
|
#1134
|
Datanode with Entrez gene 54658 linked to 54575-54579 and 54657-54659
|
minor
|
Pathvisio
|
|
martijn
|
new
|
03/03/10
|
|
#1135
|
Resize handles mouse-over wrong after rotation
|
minor
|
Wikipathways applet
|
|
tina
|
assigned
|
03/04/10
|
|
#1136
|
Merge uncategorized and all categories
|
minor
|
WikiPathways website
|
|
AlexanderPico
|
new
|
03/04/10
|
|
#1142
|
Download all pathways results in oddly named folder
|
minor
|
WikiPathways website
|
|
AlexanderPico
|
new
|
03/12/10
|
|
#1149
|
Problems loading databases in PathVisio on Mac with non-english language settings
|
minor
|
Pathvisio
|
|
martijn
|
new
|
03/17/10
|
|
#1153
|
very long query gets truncated on wikipathways web service
|
minor
|
WikiPathways web service
|
|
AlexanderPico
|
assigned
|
03/29/10
|
|
#1154
|
clipping issues with svg viewer
|
minor
|
WikiPathways website
|
|
AlexanderPico
|
new
|
03/30/10
|
|
#1159
|
find better solution for MIMShapes.registerShapes()
|
minor
|
Pathvisio
|
|
martijn
|
new
|
04/02/10
|
|
#1171
|
State is missing font attributes
|
minor
|
Wikipathways applet
|
|
martijn
|
new
|
04/27/10
|
|
#1174
|
bots incorrectly tag yeast pathways with missing xrefs
|
minor
|
WikiPathways website
|
|
AlexanderPico
|
new
|
04/28/10
|
|
#1175
|
Use MIRIAM URN's in indexer
|
minor
|
WikiPathways web service
|
|
thomaskelder
|
new
|
04/28/10
|
|
#1178
|
Curation tags look starnge on IE
|
minor
|
uncategorized
|
|
martijn
|
new
|
05/13/10
|
|
#1189
|
Description of how to add general reference is wrong
|
minor
|
uncategorized
|
|
martijn
|
new
|
05/15/10
|
|
#1191
|
Pull down menus in "Properties" sidebar are nit high enough
|
minor
|
uncategorized
|
|
martijn
|
new
|
05/15/10
|
|
#1193
|
Save can take forever
|
minor
|
Wikipathways applet
|
|
thomaskelder
|
new
|
05/15/10
|
|
#1198
|
IDMapper error when launching editor
|
minor
|
Wikipathways applet
|
|
thomaskelder
|
new
|
05/28/10
|
|
#1214
|
Cytoscape 2.7: plugin doesn't set correct visual style on loading GPML pathway
|
minor
|
Cytoscape plugin
|
|
thomaskelder
|
new
|
06/18/10
|
|
#1224
|
Negative zoom allowed => pathway is displayed inverted
|
minor
|
Pathvisio
|
|
martijn
|
new
|
07/09/10
|
|
#1254
|
Not possible to resize sidepanel after initial resize.
|
minor
|
Pathvisio
|
|
martijn
|
new
|
08/26/10
|
|
#1256
|
data node entrez links don't work
|
minor
|
WikiPathways website
|
|
Martijn
|
new
|
08/27/10
|
|
#1257
|
HTML text shown after reverting
|
minor
|
WikiPathways website
|
|
tina
|
new
|
08/27/10
|
|
#1258
|
return button from comparison page
|
minor
|
WikiPathways website
|
|
AlexanderPico
|
new
|
08/27/10
|
|
#1259
|
svg viewer (wikipathways test) - move buttons (wrong handling?)
|
minor
|
uncategorized
|
|
martijn
|
new
|
08/27/10
|
|
#1260
|
color change - no immediate effect because element is still selected
|
minor
|
Pathvisio
|
|
martijn
|
new
|
08/27/10
|
|
#1261
|
dialog positions
|
minor
|
Pathvisio
|
|
martijn
|
new
|
08/27/10
|
|
#1262
|
remove curation tag - dialog?
|
minor
|
WikiPathways website
|
|
AlexanderPico
|
new
|
08/27/10
|
|
#1271
|
Cytoscape gpml plugin: broken organism filter for tuberculosis
|
minor
|
Cytoscape plugin
|
|
thomaskelder
|
new
|
09/03/10
|
|
#1273
|
Refreshing value propertypanel for multiple objects
|
minor
|
uncategorized
|
|
FerryJagers
|
assigned
|
09/08/10
|
|
#1111
|
DiffViewer error when comparing deleted pathway
|
minor
|
Diffviewer applet
|
Milestone 27
|
martijn
|
new
|
02/04/10
|
|
#1125
|
regression: wrong anchor position on curved lines
|
minor
|
Pathvisio
|
Milestone 27
|
margot
|
new
|
02/12/10
|
|
#1250
|
Visualization plugin - using colorcoding of gene/metabolite boxes after visualization
|
minor
|
Pathvisio
|
Milestone 27
|
martijn
|
new
|
08/24/10
|
|
#1253
|
include wp paper in announcement
|
minor
|
uncategorized
|
Milestone 27
|
martijn
|
new
|
08/25/10
|
|
#1266
|
Bogus browse button in IDMapper dialog
|
minor
|
BridgeDbConfig plugin
|
Milestone 27
|
martijn
|
new
|
08/30/10
|
|
#60
|
No keyboard shortcut for editing a property. Even when a row in the property table is selected, there is no way to edit it witho
|
feature
|
Wikipathways applet
|
|
anonymous
|
new
|
01/03/07
|
|
#98
|
species selection
|
feature
|
Pathvisio
|
|
martijn
|
assigned
|
02/02/07
|
|
#114
|
FEATURE: printing.
|
feature
|
Pathvisio
|
|
anonymous
|
new
|
04/18/07
|
|
#136
|
Regression: Tooltips for visualization plugins are broken
|
feature
|
Pathvisio
|
|
anonymous
|
new
|
07/03/07
|
|
#265
|
autosave
|
feature
|
Pathvisio
|
|
justin_elser
|
new
|
11/02/07
|
|
#412
|
Pathway History table and diffviewer on the same page
|
feature
|
Diffviewer applet
|
|
martijn
|
assigned
|
03/12/08
|
|
#455
|
DiffViewer: Add feature for viewing differences in Description and Category assignment
|
feature
|
Diffviewer applet
|
|
martijn
|
assigned
|
04/16/08
|
|
#464
|
wp RFC 001 tracker bug - Ontologies
|
feature
|
Wikipathways applet
|
|
AlexanderPico
|
assigned
|
04/16/08
|
|
#466
|
wp RFC 003 tracker bug
|
feature
|
Wikipathways applet
|
|
justin_elser
|
new
|
04/16/08
|
|
#468
|
wp RFC 005 tracker bug
|
feature
|
WikiPathways website
|
|
thomaskelder
|
assigned
|
04/16/08
|
|
#471
|
wp RFC 008 tracker bug - Aliases
|
feature
|
Wikipathways applet
|
|
AlexanderPico
|
assigned
|
04/16/08
|
|
#476
|
pv RFC 004 tracker bug
|
feature
|
Wikipathways applet
|
|
martijn
|
assigned
|
04/16/08
|
|
#482
|
pv RFC 010 tracker bug
|
feature
|
Wikipathways applet
|
|
martijn
|
assigned
|
04/16/08
|
|
#483
|
pv RFC 011 tracker bug
|
feature
|
Pathvisio
|
|
thomaskelder
|
assigned
|
04/16/08
|
|
#535
|
associate PathVisio with gpml files
|
feature
|
Pathvisio
|
|
martijn
|
assigned
|
05/29/08
|
|
#548
|
auto-size labels
|
feature
|
Wikipathways applet
|
|
anonymous
|
new
|
05/29/08
|
|
#551
|
search gene in CURRENT pathway
|
feature
|
Wikipathways applet
|
|
anonymous
|
new
|
05/29/08
|
|
#565
|
Items placed off the drawing board are difficult or sometimes impossible to retireve
|
feature
|
Wikipathways applet
|
|
martijn
|
new
|
06/11/08
|
|
#572
|
User "sign-up" or watch for new pathways in particular categories would be useful
|
feature
|
Wikipathways applet
|
|
anonymous
|
new
|
06/18/08
|
|
#579
|
DataNode search results window could be sized based on number of hits
|
feature
|
Wikipathways applet
|
|
anonymous
|
new
|
06/21/08
|
|
#607
|
wp RFC 011 tracker bug: user tags / badges
|
feature
|
Wikipathways applet
|
|
AlexanderPico
|
assigned
|
08/18/08
|
|
#613
|
Allow addition of active URLs to pathway entities
|
feature
|
Wikipathways applet
|
|
anonymous
|
new
|
09/08/08
|
|
#620
|
color gradient for non-symmetric data
|
feature
|
Pathvisio
|
|
anonymous
|
new
|
09/09/08
|
|
#629
|
Feature: Find pathways by literature reference
|
feature
|
WikiPathways website
|
|
thomaskelder
|
assigned
|
09/11/08
|
|
#630
|
Feature: export all literature references to a reference manager
|
feature
|
WikiPathways website
|
|
anonymous
|
new
|
09/11/08
|
|
#637
|
copy from other color sets
|
feature
|
Pathvisio
|
|
anonymous
|
new
|
09/15/08
|
|
#648
|
Comments interface: Change position and label of "add comment" button
|
feature
|
Wikipathways applet
|
|
thomaskelder
|
new
|
10/07/08
|
|
#655
|
Last edited
|
feature
|
WikiPathways website
|
|
anonymous
|
new
|
10/08/08
|
|
#658
|
handle simultaneous edits
|
feature
|
Wikipathways applet
|
|
anonymous
|
new
|
10/08/08
|
|
#710
|
Hyperlinks to other pathways
|
feature
|
Pathvisio
|
|
martijn
|
assigned
|
11/27/08
|
|
#723
|
Add some useful shortcuts
|
feature
|
Wikipathways applet
|
|
FerryJagers
|
assigned
|
12/02/08
|
|
#725
|
Warn if pathway, gene database and expression dataset are not for the same species
|
feature
|
Pathvisio
|
|
anonymous
|
new
|
12/02/08
|
|
#730
|
Configurable batch download
|
feature
|
WikiPathways website
|
|
anonymous
|
new
|
12/05/08
|
|
#731
|
Migrate connected lines to other species
|
feature
|
WikiPathways web service
|
|
martijn
|
new
|
12/08/08
|
|
#732
|
Support for multiple linkouts per id.
|
feature
|
Wikipathways applet
|
|
martijn
|
new
|
12/08/08
|
|
#750
|
I want to hide the infobox
|
feature
|
Pathvisio
|
|
martijn
|
new
|
12/16/08
|
|
#753
|
User-defined period for save reminders?
|
feature
|
Wikipathways applet
|
|
thomaskelder
|
new
|
12/23/08
|
|
#766
|
Open up species selection
|
feature
|
WikiPathways website
|
|
AlexanderPico
|
new
|
01/16/09
|
|
#779
|
Can we support standardized webservice for Interaction databases?
|
feature
|
WikiPathways web service
|
|
andra
|
new
|
01/23/09
|
|
#786
|
Feature idea: Add browse arrows on each pathway page
|
feature
|
WikiPathways website
|
|
AlexanderPico
|
new
|
01/27/09
|
|
#793
|
Feature: Make the minimum size for he Properties/Backpage/Search tab smaller
|
feature
|
Pathvisio
|
|
martijn
|
new
|
02/05/09
|
|
#794
|
Feature suggestion: Rename the option for "Text label" (under Vis Options) to "DataNode label"
|
feature
|
Pathvisio
|
|
martijn
|
new
|
02/05/09
|
|
#797
|
Feature: Suggested changes to Edit color set window under Expression as Color>Advanced
|
feature
|
Pathvisio
|
|
martijn
|
new
|
02/05/09
|
|
#799
|
Make group/complex name visible
|
feature
|
Wikipathways applet
|
|
thomaskelder
|
new
|
02/05/09
|
|
#800
|
Show comments and literature in the DataNode section
|
feature
|
WikiPathways website
|
|
thomaskelder
|
new
|
02/05/09
|
|
#803
|
Add more group types
|
feature
|
Pathvisio
|
|
martijn
|
new
|
02/06/09
|
|
#808
|
SBML compatibility & layout extension
|
feature
|
Pathvisio
|
|
AlexanderPico
|
new
|
02/09/09
|
|
#810
|
Change shape of complexes
|
feature
|
Wikipathways applet
|
|
thomaskelder
|
new
|
02/09/09
|
|
#811
|
Feature: Email notification when "GenMAPP-Approved" pathway is updated
|
feature
|
WikiPathways website
|
|
AlexanderPico
|
new
|
02/09/09
|
|
#812
|
Feature: Add timestamp to Curation Tags
|
feature
|
WikiPathways website
|
|
thomaskelder
|
new
|
02/09/09
|
|
#817
|
Feature: Use "text label" as default for gene box whenever a data visualization is used
|
feature
|
Pathvisio
|
|
martijn
|
assigned
|
02/10/09
|
|
#820
|
Feature: Create default color set based on criteria when user opens pathway from list of Statistics results
|
feature
|
Pathvisio
|
|
martijn
|
new
|
02/10/09
|
|
#823
|
Feature: Add warning message if user doesn't enter expression in Statistics calculation
|
feature
|
Pathvisio
|
|
martijn
|
assigned
|
02/12/09
|
|
#829
|
Document deletion reason better
|
feature
|
WikiPathways website
|
|
AlexanderPico
|
new
|
02/18/09
|
|
#840
|
Feature: Changes to User Contributions page
|
feature
|
WikiPathways website
|
|
AlexanderPico
|
new
|
02/20/09
|
|
#841
|
Feature: Changes to My Watchlist page
|
feature
|
WikiPathways website
|
|
AlexanderPico
|
new
|
02/20/09
|
|
#851
|
Show GO term names in backpage cross-references list
|
feature
|
GeneDatabases
|
|
AlexanderPico
|
new
|
03/12/09
|
|
#861
|
Font selection button in Label Properties interface is not intuitive
|
feature
|
Wikipathways applet
|
|
thomaskelder
|
new
|
03/25/09
|
|
#863
|
Adding lit refs: Change what happens when you click "enter" after typing in search box
|
feature
|
Wikipathways applet
|
|
thomaskelder
|
new
|
03/25/09
|
|
#864
|
Feature: Right-click on empty part pf drawing board to add/edit lit ref
|
feature
|
Wikipathways applet
|
|
thomaskelder
|
new
|
03/25/09
|
|
#874
|
Feature: Have bots update information in Comments of curation tags
|
feature
|
WikiPathways website
|
|
thomaskelder
|
reopened
|
03/31/09
|
|
#877
|
Feature: Add searching capabilities for pathway name or keyword
|
feature
|
Pathvisio
|
|
martijn
|
new
|
04/13/09
|
|
#879
|
Do Search Engine Optimization
|
feature
|
WikiPathways website
|
|
AlexanderPico
|
new
|
04/17/09
|
|
#886
|
Supporting "other" species databases
|
feature
|
GeneDatabases
|
|
AlexanderPico
|
new
|
04/19/09
|
|
#893
|
Nice url's for portals
|
feature
|
WikiPathways website
|
|
AlexanderPico
|
new
|
05/07/09
|
|
#897
|
Advanced pathway search
|
feature
|
Pathvisio
|
|
martijn
|
new
|
05/11/09
|