Timeline
09/03/10: Today
- 10:37 Ticket #1271 (Cytoscape gpml plugin: broken organism filter for tuberculosis) created by
- As reported by Allan Kuchinsky: In the user input panel, if I select …
09/01/10:
- 15:27 Changeset [3296] by
- Added Ferry to contributors list
- 13:07 Changeset [3295] by
- Mark's patch causes NPE, so I'm trying alternative approach: only consider …
- 12:49 Changeset [3294] by
- Smoother mitochondria shape
- 12:41 Ticket #1270 (Version Check for alternative installer) created by
- When Installing PV using the alternative installer, it should occasionally …
- 11:45 Changeset [3293] by
- Adjust mouse cursor to rotation of shape, fixes #1135, patch by Tina
- 11:29 Ticket #1263 (Add GENMAPP_COMPATIBLE preference) closed by
- fixed: Comitted, thanks Mark.
- 11:28 Changeset [3292] by
- Make pathway title length check dependent on compatibility flag. Fixes …
- 11:21 Ticket #1146 (Launch browser when Ctrl+clicking on label with url) closed by
- fixed: Comitted, thanks!
- 11:21 Changeset [3291] by
- Fixes #1146: launch browser with ctrl+click on link (patch by Tina)
- 10:45 Changeset [3290] by
- Paste objects in front, fixes #449 (patch by Tina)
- 10:45 Ticket #449 (Pasted objects should be ordered in front) closed by
- fixed: Thanks, comitted.
- 10:20 Ticket #1048 (Add "thick" to the line style) closed by
- fixed: This was fixed a while ago, but we forgot to close this bug.
- 10:16 Ticket #1249 (PathVisio data import doesn't default to looking in first column for ID) closed by
- fixed
08/31/10:
- 21:21 Ticket #1267 (Show literature reference numbers in png export?) closed by
- worksforme: Ah, I forgot about the pathway page png. That's important! The workaround …
- 11:32 Ticket #1268 (I can't download pathway files for Homo sapiens (Analysis collection ...) closed by
- fixed: Fixed batchDownload.php, turned out all cache for a pathway was updated by …
- 11:05 Ticket #1269 (Biopax converter fails to convert WP1601) created by
- When trying to download …
- 10:03 DevMeetings edited by
- (diff)
- 03:10 Ticket #1268 (I can't download pathway files for Homo sapiens (Analysis collection ...) created by
- I can't download pathway files for Homo sapiens (Analysis collection …
08/30/10:
- 23:32 Ticket #1267 (Show literature reference numbers in png export?) created by
- Current the reference numbers are shown in png exports. Should we skip …
- 16:16 Ticket #1265 (Comma only lines created in .csv by MS-Excel prevent import) closed by
- duplicate: This is actually a duplicate of #1208, it's fixed now.
- 16:15 Ticket #1208 (Blank lines in Expression Data give errors in PathVisio) closed by
- fixed: Found the problem, it's caused by a NullPointerException? when the …
- 15:22 Ticket #1266 (Bogus browse button in IDMapper dialog) created by
- Using the BridgeDbConfig? plugin, in the IDMapper dialog: When opening the …
- 11:55 BugsStart edited by
- (diff)
- 11:55 BugsStart edited by
- (diff)
- 10:40 Ticket #1265 (Comma only lines created in .csv by MS-Excel prevent import) created by
- I had some troubles importing a .csv file. MS-Excel seems to add empty …
- 09:34 Milestone Milestone 26 completed
- 09:33 Ticket #1264 (gpml download doesn't work for homo sapiens) closed by
- fixed: Turned out that the species prefix was incorrectly registered. This is …
- 09:03 Ticket #1264 (gpml download doesn't work for homo sapiens) created by
- The archive download: …
- 08:47 Ticket #1246 (GPML -> image export results in transparent datanodes) closed by
- invalid: The datanodes seem to have the transparant attribute set to true on the …
08/28/10:
- 11:11 Ticket #1263 (Add GENMAPP_COMPATIBLE preference) created by
- There's a 50 character limit on the pathway name. According to …
- 00:01 Ticket #1152 (Make user contact info (email) appear on user page) closed by
- fixed: email notification now works for watchlist and talk pages
08/27/10:
- 23:43 Changeset [3289] by
- updated mitochondria shape and icon
- 21:11 PluginDevelopment edited by
- (diff)
- 21:11 PluginDevelopment edited by
- (diff)
- 20:38 PathVisioDownload edited by
- (diff)
- 20:38 WikiStart edited by
- (diff)
- 20:37 ReleaseNotes edited by
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- 20:37 ReleaseNotes edited by
- (diff)
- 20:34 Ticket #1046 (Create plugin hook to add tab to PathwayElementDialog) closed by
- fixed
- 20:22 Changeset [3288] by
- Milestone 26 release tag
- 20:21 Changeset [3287] by
- Milestone 26 release branch
- 20:10 Changeset [3286] by
- Updated version no. for release
- 14:09 Changeset [3285] by
- Default style for cellular components
- 14:09 Changeset [3284] by
- Fix initialization bug, implement relative curve in Path2Java tool
- 14:09 Changeset [3283] by
- Deprecate old GenMAPP shapes rather than remove them, for backwards …
- 12:13 Ticket #1262 (remove curation tag - dialog?) created by
- whenever i want to delete or save something, usually a dialog pops up and …
- 12:07 Ticket #1261 (dialog positions) created by
- currently the dialogs are always positions depending on the panel. after …
- 11:49 Ticket #1260 (color change - no immediate effect because element is still selected) created by
- I selected an element (e.g. GeneProduct?) and changed the color in the …
- 11:38 Ticket #1259 (svg viewer (wikipathways test) - move buttons (wrong handling?)) created by
- in the svg viewer which is only available on the wikipathways test site, …
- 11:25 Ticket #1258 (return button from comparison page) created by
- there is no return button from the special comparison page to the main …
- 11:18 Ticket #1257 (HTML text shown after reverting) created by
- after reverting to a previous version the entry in the history list has a …
- 11:08 Ticket #1256 (data node entrez links don't work) created by
- when clicking on a link to Entrez the id gets not replaced and an error …
- 10:52 Changeset [3282] by
- Pick the first column of the dataset as id column by default, fixes #1249
- 10:52 Changeset [3281] by
- Added breaks in switch in PopupDialogHandler?
- 04:52 Changeset [3280] by
- New objects panel: - removed old shapes - removed old receptor/ligand …
- 01:36 Ticket #1255 (Pathway archive quick links on pathway page) created by
- It would be nice to have a quick way of navigating back to a particular …
08/26/10:
- 17:06 Changeset [3279] by
- Remove problematic @Override annotations
- 16:23 Changeset [3278] by
- Add a hook for the pathway element dialog. Fixes #1046
- 02:18 Ticket #1242 (pathway tab label is obscured when viewing thread) closed by
- fixed
- 02:15 Ticket #1254 (Not possible to resize sidepanel after initial resize.) created by
- After resizing the side panel, the panel seems to have a fixed width that …
- 02:13 Ticket #1251 (Items in Objects side panel are not displayed properly on startup) closed by
- invalid: I'm closing this ticket since it was due to some changes to the PathVisio …
- 01:27 Ticket #1239 (Discussion feeds on main page should not include deleted discussions) closed by
- fixed
08/25/10:
- 21:00 DevMeetings edited by
- (diff)
- 20:16 DevMeetings edited by
- (diff)
- 19:57 Ticket #1252 (Link to HuGO on PathVisio site doesn't work) closed by
- fixed: I have updated HUGO to HGNC with a proper link. Also updated other …
- 19:56 DatabasesMapps edited by
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- 19:54 DevMeetings edited by
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- 19:52 DevMeetings edited by
- (diff)
- 19:51 DevMeetings edited by
- (diff)
- 19:45 DatabasesMapps edited by
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- 19:14 DatabasesMapps edited by
- (diff)
- 13:34 Changeset [3277] by
- Added missing license headers
- 12:57 Ticket #1253 (include wp paper in announcement) created by
- Include this in the next announcement "WikiPathways? biotransformation …
- 12:54 ProjectIdeas edited by
- (diff)
- 09:52 Ticket #1252 (Link to HuGO on PathVisio site doesn't work) created by
- The link to HuGO on …
08/24/10:
- 16:59 PathVisioDownload edited by
- (diff)
- 15:56 Ticket #1251 (Items in Objects side panel are not displayed properly on startup) created by
- The objects side panel is being displayed right on startup (see screenshot …
- 09:35 Ticket #1250 (Visualization plugin - using colorcoding of gene/metabolite boxes after ...) created by
- In a pathway genes are shown as black boxes and metabolites as blue boxes. …
08/20/10:
- 11:39 Ticket #832 (Add copy/paste items to right-click menu) closed by
- fixed: Comitted, thanks!
- 11:38 Changeset [3276] by
- Added c/p actions to pop-up menu, Fixes #832
- 10:29 Changeset [3275] by
- Added Tina to aboutDlg, added hyperlink to aboutDlg, centralized hyperlink …
08/19/10:
- 14:52 Ticket #858 (After selecting zoom-to-fit, show actual percentage) closed by
- fixed
- 14:50 Changeset [3274] by
- Fixes #858, patch by Tina
08/18/10:
- 23:22 Ticket #1249 (PathVisio data import doesn't default to looking in first column for ID) created by
- It seems the data import in PathVisio doesn't by default look in the first …
- 23:05 Ticket #1211 (Draw additional shapes for PathVisio) closed by
- duplicate
- 23:03 Ticket #1210 (Modify resize function to preserve width-height ratio) closed by
- fixed
- 23:00 Ticket #1207 (GSoC, Shapes drop-down: buttons stay selected after clicking.) closed by
- fixed
08/17/10:
- 23:35 Changeset [3273] by
- Changed output to create a Wikipedia template page
08/16/10:
- 21:08 Changeset [3272] by
- Parameter model for building dialogs easily
- 21:04 Changeset [3271] by
- Extra flexibility in BrowseButtonActionListener?
- 19:06 Ticket #970 (Install RSS extension) closed by
- fixed
- 18:10 Changeset [3270] by
- avoid referring to VPathwaySwing from within VPathway
- 11:31 Changeset [3269] by
- Remove obsolete biopax plugin, new one can be found in pvplugins …
- 08:29 Ticket #1247 (Covert pathway link labels to datanodes) closed by
- duplicate: Duplicate of #1221, which contains the original plan (of which converting …
08/15/10:
- 20:26 Ticket #1247 (Covert pathway link labels to datanodes) created by
- Convert labels in the WikiPathways? content that refer to a different …
- 16:43 Changeset [3268] by
- fix the bug - "pathway mess up during zooming or panning …
08/13/10:
- 13:06 Ticket #1246 (GPML -> image export results in transparent datanodes) created by
- See: …
- 11:04 Ticket #1245 (BridgeDbConfig plugin settings should be remembered) created by
- Settings should be rememberd The plug in does not remember BridgeDb …
- 10:41 BridgeDbConfigPluginHelp edited by
- (diff)
08/12/10:
- 13:56 AlternativeInstallation edited by
- (diff)
- 13:56 AlternativeInstallation edited by
- (diff)
- 13:55 AlternativeInstallation edited by
- (diff)
- 13:54 AlternativeInstallation edited by
- (diff)
- 13:52 BridgeDbConfigPluginHelp edited by
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- 13:51 BridgeDbConfigPluginHelp edited by
- (diff)
- 13:51 BridgeDbConfigPluginHelp edited by
- (diff)
- 13:33 BridgeDbConfigPluginHelp edited by
- (diff)
- 12:54 BridgeDb edited by
- (diff)
- 12:53 BridgeDbConfigPluginHelp edited by
- (diff)
- 12:51 BridgeDbConfigPluginHelp edited by
- (diff)
- 12:50 BridgeDbConfigPluginHelp edited by
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- 12:49 BridgeDbConfigPluginHelp edited by
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- 12:38 BridgeDbConfigPluginHelp edited by
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- 12:34 BridgeDbConfigPluginHelp edited by
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- 12:32 BridgeDbConfigPluginHelp edited by
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- 12:31 BridgeDbConfigPluginHelp edited by
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- 11:13 BridgeDbConfigPluginHelp created by
- 11:06 PluginDocumentation edited by
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- 11:05 PluginDocumentation edited by
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- 02:43 Ticket #1244 (Prototype Infobox for Pathway Pages) created by
- Using Chetan's new work relating pathways and other pathway stats, start …
- 02:42 Ticket #1243 (Incoporate Chetan's Ontology Work) created by
- It's about time to incorporate Chetan's work on ontology tagging and the …
08/11/10:
- 19:58 DevMeetings edited by
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- 19:57 DevMeetings edited by
- (diff)
- 19:31 DevMeetings edited by
- (diff)
08/09/10:
- 20:58 Ticket #1242 (pathway tab label is obscured when viewing thread) created by
- The tab label looks like this: <nstab-pathway> which is not exactly …
- 20:50 Changeset [3267] by
- accelerating pan and zoom using scroll button
- 20:42 Ticket #1241 (Pathways not easily linked from discussions page) closed by
- worksforme: There is a link to the full Discussion page at the top of the thread. From …
- 20:37 Ticket #1240 (Links to discussions do not always work) closed by
- duplicate: If you are referring to this link …
- 17:37 Ticket #1241 (Pathways not easily linked from discussions page) created by
- If you end up in a discussion related to a specific pathway, for instance …
- 17:34 Ticket #1240 (Links to discussions do not always work) created by
- There are links on the homepage that refer to "latest discussions". …
08/06/10:
- 22:13 Ticket #1239 (Discussion feeds on main page should not include deleted discussions) created by
- We should exclude deleted discussion from showing up on main page. This …
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