Plugin connects to Biomart to retrieve additional information about GeneProdcuts.
Import and export pathways in BioPAX level 3.
The BridgeDb configuration plugin let’s you configure identifier mapping resources to be used in PathVisio.
Plugin enables visualization of complex component node data on the parent complex.
The FYI (FindYourInteractions) plugin suggests suitable identifiers for the interactions by querying
Gene set enrichment analysis plugin for PathVisio
Basic GO plugin to visualized genes annotated with a specific GO term.
Exports pathways and pathway statistics results as HTML pages.
Plugin to visualize data on Interactions.
Automated way to create data nodes from file.
A mini map view of the pathways that allows easy navigation in larger pathways.
NIMWiz assists looking up identifiers for named metabolites/genes
The PathSBML plugin allows researchers to visualize and overlay data on the same pathway models they use in simulation experiments.
PathVisioRPC is an XML-RPC interface for PathVisio.
The Quick Search plug-in adds a search box with which one can search for identifiers and text within the pathway that is currently open.
Visualize regulatory interactions in the side panel of PathVisio
Draw diagrams with the Systems Biology Graphical Notation (SBGN)
Importing baseline expression data from Expression Atlas
Convert a pathway element into another type, e.g. Label into Metabolite.
Browse, search and update pathways from WikiPathways